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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015817122.1_cds_XP_016499063.1_13024
CDS Infomation

[gene=LOC107817707] [db_xref=GeneID:107817707] [protein=chaperone protein DnaJ-like] [protein_id=XP_016499063.1] [location=join(3311..3607,3818..3886,4078..4173,4305..4429,6451..6646,8158..8333,9097..9226,9551..9711,10793..10869,11904..11955,12281..12506)] [gbkey=CDS]
Sequence

ATGCCGGCTATCCATAACCCTTACTGGTTCTGCGCTGCGTCTAATAATAACCCGTACTGC
TCTCTCTCGAGCTTCAGCTTCCCTAAAACCTTCACATTTTCGAGCTCCTTATCTCCACCT
CTCAAATTCGTCTCTATTAAGCCTAATTTGTTCCCCGTTAACCGGAAACGACGGCGCTTT
GTTAGTGTTAAATCTGTTGCGAAGTCGACCAGCTCCGACCTCTATTCAGTTCTTAATGTC
AGTAGAAATGCAACGCTCAAAGAAATTAAAGCATCTTATCGCAAGCTTGCTCGCAAGTAT
CATCCTGATGTGAATAGAAATCCTGGAGCTGAAGAAAAGTTTAAAGAGATTAGTGCTGCA
TACGAGGTATTATCAGATGATGAGAAGAGGTCTTTATATGACCGTTTTGGCGAGGCAGGG
TTGCGAGGAGAATATAATGTGGCTGGTAGCGGTGCGCAGGGGGTGGACCCTTTTGAAATA
TTTTCTGAGTATTTTGGAGAGTCAAGTGGCTTTTTTGGAGGAAGTGGTGGATCAGGAGGC
TTCAGCTTCGATTTCAGGAATATGGGGAGGCAGGATCTCGATATTCATTATGACCTTGAT
TTGAGCTTTGAAGAGTCTATATTTGGAGGGCAGCGAGACATCGAAGTACCTTCTCTCGAT
GCATGTGATAGTTGTGGCGGGACTGGTGCTAAATCTAGCAGTTGTGTTAAAGTCTGTTCT
GACTGTGGCGGAAAAGGAGGAGTGGTGAAAACACAGAAAACACCTTTTGGAATAATGTCT
CAGGTATCTATGTGCTCGAATTGTGGAGGTAATGGAAGGATAGTAACTGATCATTGTCGA
AAATGTGGTGGCCGTGGTCAAGTACAATCAAAACGAAGTATCAAAGTGGTTGTTCCACCT
GGAGTTCATGACGGAGCCACAATGCAAGTTCGAGGAGAGGGTAACATTGACAAGAAAAGT
AGTATAGCTGGTGACCTCTATTTGATCATCCACGTCAAACAAAAACGTGAAATTTGGAGG
GATGGTCTTAACCTGTACTCAAAAGTAGACGTTGATTTTACTGAGGCCATTCTGGGGACA
GTTAAGAAGGTGACAACTGTAGATGGTATGAAAGATCTTCAGATTCCTCCTGGATGTCAA
CCTGGAGAAAAGATTAAAATGTCAAAAATGGGAGTGCCAGACATGAATAGATCTTCAGTG
AGAGGAGATCATCTTTTTCTGATAAATGTTCAGATCCCGAAGAATCTCAGTGATGCAGAA
CGCACCTTAGTTGAGAAGTTGGCTTCACTTAGAGCAACATCCAAGCAGTATTCAGTCTCA
TCTGGTGGTGATAGTAAAGGTGTTGCACGTTTTTGGAAACCGATCAAAGACTTTCTGAGG
ATGGGGCGATCTGGTCGAAGATTTGCATCAATTGGCACGGACACAATAGTTTTTTGGAGT
TTGAACAGATCATTACCTAGTTTTCCTCAAATAACATCACTTTTTGCTGTTTTCATTGGA
ACATGTATTTTTGCATTGGTTAAAGTTTGTTGTTATAAAATTTTGCAGCCGAAACAATCA
GCGAAACTAAAGTTTCTTCTTCACAGGGAAATTAAAGAGCAATAG

Peptide Sequence

PEP ID

XP_016499063.1
PEP Infomation

PREDICTED: chaperone protein DnaJ-like [Nicotiana tabacum]
Sequence

MPAIHNPYWFCAASNNNPYCSLSSFSFPKTFTFSSSLSPPLKFVSIKPNLFPVNRKRRRF
VSVKSVAKSTSSDLYSVLNVSRNATLKEIKASYRKLARKYHPDVNRNPGAEEKFKEISAA
YEVLSDDEKRSLYDRFGEAGLRGEYNVAGSGAQGVDPFEIFSEYFGESSGFFGGSGGSGG
FSFDFRNMGRQDLDIHYDLDLSFEESIFGGQRDIEVPSLDACDSCGGTGAKSSSCVKVCS
DCGGKGGVVKTQKTPFGIMSQVSMCSNCGGNGRIVTDHCRKCGGRGQVQSKRSIKVVVPP
GVHDGATMQVRGEGNIDKKSSIAGDLYLIIHVKQKREIWRDGLNLYSKVDVDFTEAILGT
VKKVTTVDGMKDLQIPPGCQPGEKIKMSKMGVPDMNRSSVRGDHLFLINVQIPKNLSDAE
RTLVEKLASLRATSKQYSVSSGGDSKGVARFWKPIKDFLRMGRSGRRFASIGTDTIVFWS
LNRSLPSFPQITSLFAVFIGTCIFALVKVCCYKILQPKQSAKLKFLLHREIKEQ

Transcript Sequence

Gene sequence data has not been registered.